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Hi everyone,
I think I have an issue with spike sorting using kilosort. It seems that in some cases the same spike is present in two different clusters (same channel). In the first figure, you can…
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[link to spikeinterface page about this](https://spikeinterface.readthedocs.io/en/0.13.0/modules/sorters/plot_4_sorting_concatenated_recordings.html)
- [x] find how to select multiple folders at th…
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Running this snippet:
```
test_key = {'nwb_file_name': 'RS1220240809_.nwb', 'sort_group_id': 0, 'interval_list_name': '02_r1',
'preproc_param_name': 'franklab_tetrode_hippocampus', 'te…
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I'm interested in experimenting with something. Would it be straightforward to kill a cluster manually, then re-run part of the sorting algorithm to resort that cluster's spikes among the remaining te…
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**Is your feature request related to a problem? Please describe.**
Right now when recording file from spike sorting v0 pipeline is deleted from `recording` dir for some reason, it is not accessible e…
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hello i am trying to run this spike sorting code on my data but i am getting an error at
`d_f = [d_f, zeros(1, w_post)];`
its a horz_cat error. I am new to matlab and do not understand how to deal …
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Hi!
I have been attempting to use spike forest for some spike sorting benchmarking .
I was able to clone the repo and I also downloaded the dependency Kachery-but I am having the following error whe…
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For this dataset:
https://neurosift.app/?p=/nwb&url=https://api.dandiarchive.org/api/assets/07eab05e-7002-4522-8498-359b952ab4a2/download/&dandisetId=000897&dandisetVersion=0.240605.1710
it has …
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Hello, we are attempting to run the scripts from the `extract_from_npx` module. When running the following command: `python -W ignore -m ecephys_spike_sorting.modules.extract_from_npx --input_json
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@magland
Should we include electrodes location data as a pre-validation step for SI-based sorters?
I just encountered an error during job execution due to a NWB file not having valid electrodes loc…