AllenInstitute ecephys_spike_sorting issues

AllenInstitute / ecephys_spike_sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes

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Memory Mapping Implementation

#92 zmingmin closed 1 month ago
3
bug fix for waveform metrics and quality metrics

#91 jingjie-li closed 3 months ago
1
Bump jinja2 from 2.11.2 to 3.1.3

#90 dependabot[bot] opened 10 months ago
0
Add instructions for replicating functionality in SpikeInterface

#89 jsiegle closed 11 months ago
2
Bump requests from 2.23.0 to 2.31.0

#88 dependabot[bot] closed 11 months ago
1
Bump pygments from 2.6.1 to 2.15.0

#87 dependabot[bot] closed 11 months ago
1
Bump urllib3 from 1.25.9 to 1.26.18

#86 dependabot[bot] closed 11 months ago
1
Bump certifi from 2020.4.5.1 to 2023.7.22

#85 dependabot[bot] closed 11 months ago
1
Bump scipy from 1.4.1 to 1.10.0

#84 dependabot[bot] closed 11 months ago
1
Bump joblib from 0.14.1 to 1.2.0

#83 dependabot[bot] closed 11 months ago
1
mean waveforms linear regression error

#82 rjp109 opened 1 year ago
1
Executable for median subtraction for MacOS

#81 jazlynntan opened 1 year ago
1
Why are mean_waveforms worise by using the temp_wh.dat as row data than .bin file?

#80 PathwayinGithub opened 1 year ago
2
output json

#79 tianw6 closed 1 year ago
1
update common/SGLXMetaToCoords.py

#78 cagjony closed 1 year ago
1
Questions regarding create_input_json.py setup

#77 petesass opened 1 year ago
1
Extracting NPX data recorded with Open Ephys on Linux

#76 vncntprvst closed 1 year ago
2
PCmetrics values are not constant for multiple runs

#75 JRicardo24 opened 2 years ago
3
PCmetrics not being calculated for some clusters

#74 JRicardo24 opened 2 years ago
5
raise InvalidGitRepositoryError

#73 a12468 opened 2 years ago
2
"Files not available" on Quality Metrics module

#72 JRicardo24 closed 2 years ago
2
Postprocessing

#71 DaniMagyar closed 2 years ago
2
Concatenating multiple runs

#70 harshk95 opened 2 years ago
4
fixed a typo

#69 jingjie-li closed 3 years ago
0
typo fix

#68 jingjie-li closed 3 years ago
1
build error on spike median subtraction module

#67 Lozanoda closed 3 years ago
2
documentation request

#66 WeissShahaf opened 3 years ago
3
Allen internal pipeline

#65 greggheller closed 3 years ago
0
Allen internal pipeline

#64 greggheller closed 3 years ago
0
Allen internal pipeline

#63 greggheller closed 3 years ago
0
Allen internal pipeline

#62 greggheller closed 3 years ago
0
Marshmallow Validation Error

#61 lihao881230 opened 3 years ago
5
Compatibility with Kilosort3

#60 jsiegle closed 3 years ago
0
kilosort post-processing module for KS3 data

#59 LaurenzMuessig closed 3 years ago
3
Updates for Kilosort3 compatibility

#58 jsiegle closed 3 years ago
0
Mean waveforms: Value error

#57 Kasia-Bz opened 3 years ago
1
Error running mean_waveforms module from curated kilosort output

#56 edwardyan95 opened 3 years ago
10
in KS2.5 channel_map.npy is now a row vector

#55 LaurenzMuessig closed 3 years ago
2
Error calculating d_prime

#54 ldclaar opened 4 years ago
1
Two more checks for PC metrics

#53 mmyros closed 4 years ago
5
l_ratio

#52 bartulem closed 4 years ago
2
Parallelization using joblib

#51 mmyros closed 4 years ago
1
compiling median_subtraction

#50 RobertoDF closed 4 years ago
3
Fix PC metrics in cases where spike_templates != spike_clusters

#49 jsiegle closed 4 years ago
0
fix PC feature concatenation in silhouette score

#48 plodocus closed 4 years ago
1
Bug in calculate_silhouette_score

#47 plodocus closed 4 years ago
0
Marshmallow 3/Argschema 2 compatibility

#46 saharmanavi closed 4 years ago
2
PC-based quality metrics on data from Kilosort 1 fail

#45 plodocus closed 4 years ago
9
get_sessions method missing?

#44 nsteinme closed 5 years ago
4
The variable silhouette_score shadows import

#43 mmyros closed 5 years ago
0