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I am running into the following error when I try to run the code
I have followed the…
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Please provide as much information as you can:
* **Suggested term label:**
Neuropeptide-ligand activity
* **Definition (free text)**
Activity of any secreted gene product with the capacity to…
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Hello,
I have successfully ran RGT Hint to do differential transcription factor foot printing for ATACseq data. I am using RGT's HG38 human genome to align my data to, and have specified that the s…
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Hello! I am using the sRNAtoolbox docker and cannot seem to populate my database with Xenopus tropicalis. I am having no problem with loading data for other species, so I am curious if this is an X.tr…
r0ark updated
2 years ago
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When this issue was opened, 151 active ontologies in the OBO Foundry did not have a `publications:` entry in their metadata. This field is used to generate the citation information on the ontology pag…
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When providing gimme scan with a bedfile with:
chrom:end-start
instead of
chrom:start-end
gimme scan doesn't crash but instead calculates the same score for each region.
Crashing or an error…
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I've found some interesting results regarding variants in primary microRNA sequences, but cannot seem to find databases of primary microRNA annotations for my species (Xenopus).
Is there a databas…
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Alliance has a cross reference file for genes that we can use which is a more compact format than the larger BGI files.
https://fms.alliancegenome.org/download/GENECROSSREFERENCE_COMBINED.tsv.gz
…
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The phenotypes based on these patterns...
abnormalAbsenceOfMotilityOfCellularComponentInLocation
abnormallyDecreasedMotilityOfCellularComponentInLocation
abnormallyIncreasedMotilityOfCellularComp…
seger updated
2 years ago
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Note: all comments in the following apply to both `subject` and `object` fields.
The normal mapping case is when one term in a source set (subject) is mapped to exactly one term in the target set (…