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So I'm really eager to get my new changes integrated in Model SEED, but the object update is an issue. I've got two possible solutions, that could both work quite well actually, but both require some …
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Correction needed for raw affiliation Department of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park , Norwich NR4 7UH , UK; The Sainsbury Laboratory, University of East Anglia, N…
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Settle on an analysis plan for plasmid data. Report:
```
PLASMID_FAMILY
PLASMID_BEST_MATCH
PLASMID_COVERAGE
PLASMID_SNVS_TO_BEST_MATCH
PLASMID_CARBAPENEMASE
PLASMID_INC_GROUP
```
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One of the things that will happen as we work with teams in manually curating their metabolic models, is that we will find compounds that are erroneously merged, or not. Sugars are a culprit here bec…
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**Describe the bug**
After opening a study, you can't open individual spectra from the study queue. For example, double-clicking the spectrum name or dragging it to a viewport or right-clicking and …
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Hello,
I am working with Chip-seq data (Histone modifications) from Salmo salar and I would like to ask you if it is possible to request the genome and genome size file for this organism?. Or any he…
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I am a biochemistry grad student from University of Kentucky, right now I am using python for my research project. I have issues with docopt, I wonder whether you can help me. I am trying to have —ou…
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## Short description of the problem
"ValueError: max() arg is an empty sequence" was encountered after running anvi-reaction-network.
## anvi'o version
Anvi'o ..................................…
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Move 'Gut Microbiome Analytic System (Microbiome)' to _Past Projects_ on [hivelab.biochemistry.gwu.edu/projects](hivelab.biochemistry.gwu.edu/projects).
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Dear yokasheh,
It has come to our attention through [FontFinder](http://www.fontfinder.io) that your hosting of akkurat.otf in this _public_ repository could be a potential violation of the End User …