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This issue is intended to initiate discussion on how Translator clinical KPs can best leverage the genetics knowledge available via the Translator Genetics Provider.
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I'm thinking about trying this out for a backend for my VEBA eukaryotic binning module (https://github.com/jolespin/veba) as an alternative to MetaEuk.
Looking at the examples here:
```
Helixer.…
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Hi,
Could you explain what is --gdistkey and provide an example format? And what is the difference between --gdistkey file and --map file?
Best,
Kun
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IDK what it's supposed to do in ss13 but you can put produce into the seed extractor for seeds so having clippers is redundant. I think it'd be better to be consistent.
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The ClinGen G6PD VCEP recommends trying to make the MONDO IDs consistent with the most recent WHO guidelines of the classification of G6PD deficiency ([https://www.who.int/publications/m/item/WHO-UCN-…
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hi,
Can moloc be used for co-localization analysis of GWAS data from multiple case-control studies?
AI-10 updated
2 years ago
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@jmonlong says we use `vg add` for some structural variant graph stuff.
Looking at the code, `vg add` does not appear to create paths for the alleles of the variants it adds.
This means we can't…
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Hi
I'm trying to run phase_common_static on my cow array data, and blocked with this error:
phase_common_static --region 1 -I huellas.vcf.gz -O huellas_prueba.bcf --log log.txt -T 8
[SHAPEIT5] p…
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Provide trainings with details about the algorithms of the main analysis to help user really understand what is happening .
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[Suggestion to add amplicon resequencing data-processing functionality, brief description of new scripts to aid in this, and request for guidance on unit testing or code review]
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## Justification …