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How can I fix the below error?
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[2024-10-18][16:55:48][hificnv][INFO] Starting hificnv
[2024-10-18][16:55:48][hificnv][INFO] cmdline: hificnv --bam ./MFB_591C/MFB_591C_DV.haplotagged.bam --maf …
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**Describe the issue**
I am analyzing whole genome sequencing(WGS) data in rice(Oryza.sativa) plants. When I use the following command to create the rice database, I encounter this problem. It should…
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Hello,
I ran Genomescope 2.0 on two HiFi datasets for two plant genomes. In both cases I get unexpected results and I am unsure of how to interpret them.
Genome 1:
http://genomescope.org/genome…
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Hi, I would like to know how STAR usually handles highly variably gene sequences like V(D)J sequences that code for parts of the TCR / BCR (T-cell and B-cell receptors), please?
I guess it depends …
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Greetings,
I am trying to submit different genome files (.fasta .fna, .fa) to the Comprehensive Genome Analysis or Genome Annotation tools. Both returned this error (never happened before) -
*E…
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## BUG/ERROR report
### System information
* Tripal Version: 3
* Drupal Version: 7.59
* PostgreSQL Version: 9.6.16
* PHP Version: 7.3.13
### Issue description
We'd like to use the…
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http://www.cell.com/cell-systems/abstract/S2405-4712(15)00113-1
@arahuja looked into this a few months and said it still wasn't in dbGAP
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### Description of the bug
Hello,
I am having trouble with the sample input file. I have .csv file with correct file names and format as described in the pipeline page (also attached here). I get …
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Dear Dr. Lin:
This https://rpubs.com/ZhaotongL/cisMRcML_vignette seems quite easy to understand. Thanks!
However, my **exp_df** and **out_df** do NOT have **cor** and **cor_se**. The above tu…