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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Description of the Bug/Issue
Hi @peterk87,
We would like to ask whether the `r1041_e82_400bps_sup_g615` mod…
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Previously we have not included a plot that gives us a histogram of read lengths because most of our reads have been Illumina reads with a fixed cycle length per run. With 3rd generation platforms rea…
mp15 updated
10 months ago
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### What happened?
Hi,
I have been trying to get this workflow to run for awhile with no success. When attempting to run the workflow on demo data it rapidly fails and produces a "stops with err…
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# Bactopia v3
I am making progress towards a version 3 release of Bactopia (🥳). This version of Bactopia is going to introduce some fun an exciting things, but at the same time its going to break …
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### Data Owner Name
DNAstack terms of use,Creative Commons Attribution 4.0 International,CC BY-4.0
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
#…
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I completed the canu tutorial for the ONT data with no problems. I then tried to use my own data by running the following command:
`/home/hh/canu/Linux-amd64/bin/canu \
-p HBV -d HBV-oxford \
…
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Build on DGX-A100 wirh CUDA 12.1 and CUDA Toolkit 12.1 appears successful. However with ctest:
```
ctest --test-dir cmake-build
Internal ctest changing into directory: /home/vastdata/kartik/dorado/…
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Hello!
After the alignment is complete, isoquant processes the data by chromosome. isoquant does run, however python3 consumes a lot of memory until it runs out of memory and crashes. I have only set…
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Hello!
I am trying to use your pipeline, however I am having some trouble with Freyja.
Below i have included my terminal input and output.
Input:
```
user@user:~/Desktop/SARS-Cov-2/wastewat…
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Hello,
I'm running MOP2 on a Macintosh computer with Nextflow 21.10.6 build 5660 and Guppy 6.0.1. MOP2 will run if I start it with the fastq files, but if I try to run basecalling with fast5 files …