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@frhl These are comments/suggestions I wrote down when I was testing the current app version. I show them as checklist here but we can discuss to modify them as appropriate. I'm also starting to get i…
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Hi,
I wonder where I can access the fasta files of the genomes for the RNA-viruses within Serratus.
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**Still working on this**
In this issue I will compile terms for inclusion (either imported or newly created) in VIDO pertaining to immune responses. I also suggest viral immune response specific axi…
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This section includes a living Google doc form of the review on helicases as therapeutic targets, which can be viewed and edited through the following link.
https://docs.google.com/document/d/14GnyDP…
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(METABOLIC-v4) lizhihua@lizhihua-T640:/media/lizhihua/software/METABOLIC-v4/METABOLIC$ ./run_to_setup.sh
tar (child): Accessory_scripts.tgz: Cannot open: No such file or directory
tar (child): Erro…
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If we can create our resources using the `http://identifiers.org/...` URI / URL values then our SKOS RDF becomes more convenient to consumers.
We could then link BEL RDF to _identifiers.org_ Concept …
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Requests to the mapping API now return the error `Error in fetching metadata`. The same queries work if the IDs are passed with the `query` parameter (space separated list) rather than as a file, whic…
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Hello,
thank you for operating such a great tool. Everything goes well when I run METABOLIC-C.pl until I encounter an error in the gtdbtk
> ERROR: Uncontrolled exit resulting from an unexpected e…
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hello, when I use the metabolic-C, i encounter some mistakes.
I ran the code on linux (System: CentOS)
Here is the code I ran
`perl /mnt/data/software/miniconda3/envs/metabolic/METABOLIC_runnin…
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ID range used so far is SJAG_00004 - SJAG_06643 and SJAG_16452-16460
so for new genes I will use
SJAG_07000 - onwards
- new gene
- [x] SJAG_07000 SPAC26A3.16 (missing syntenic ortholog 35…