-
I'm transferring the discussion from the SBOL slack channel to here.
I'm collaborating with groups that work with plant synthetic biology, and they developed libraries of parts where 5' and 3' UTRs…
-
Hi,
I am trying to get the hill number, but it requires the error bar parameter file.
To generate the error bar parameter file, I will need a directory which has all the error bar fitting file.
Ho…
-
In preparation for creating a [cytoscape.js](http://js.cytoscape.org/) ipywidget as an nbextension, I figured I would create a simple stripped down interactive widget using another better-known and p…
-
Compute tasks (conversion/analysis) are currently run on laptops, and mostly within matlab. Requirements should be modest to run these on a server initially.
-
If a specimen, OBI:0001479, is collected from a human with a patient role, that specimen is sliced and stained, and a pathologist examines it, one would hope that the pathologist can assign an AJCC hi…
-
Hi all,
I just read the LASSIE paper and wanted to compare the results to libroadrunner I was involved with
See:
https://www.ncbi.nlm.nih.gov/pubmed/26085503
which achieves in my own experience ~5…
-
A nice review that summarizes many SSA methods is in [1] Ch. 3.
Some SSAs they we might consider implementing (there are others that could be added that they don't examine):
- [x] Sorting Dire…
-
@Yuri05: your decision; but I would rename the Examples to "Nascent state" or alternative wording discussed in other issue, and include "Example" as one topic there along with e.g. the publication lis…
-
AM has migrated onto EmU version 6.3. Previously a job has run at their end which was written by us, which created extracts and SFTPd them to the upload server.
A new job needs to be written. Inves…
-
Current SBOL RNA-related glyphs (i) do not capture the range of RNA functions and (ii) where they do exist are not expressive enough to precisely annotate the RNA function. A new set of glyphs that mo…