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Hello,
I am doing single nuclei RNA seq and have issues with cellranger discarding lots of reads and would like to directly compare between optimizing the cellranger reference to deal with overlaps e…
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Project Title: Cell hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomicsProject UUID: f81efc03-9f56-4354-aabb-6ce819c3d414Wrangler/s: William,G,Sullivan…
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Hi, nice work!
If I would to use [pearson residuals ](https://scanpy.readthedocs.io/en/stable/generated/scanpy.experimental.pp.highly_variable_genes.html)to normalize and find hvgs, I'm wondering whe…
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Testit ei mene läpi koska doublet pyöristyy? sovelluksessani eri tavalla kuin testit odottaa. Esimerkiksi:
Minun sovellus 1092.3
Testi 1092.3000000000002
Minun sovellus 54283.02748732515 …
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8500 RUB reward can be claimed by anyone who completes this task.
This bot should be able to trade via simulation or real API.
Simulation API example: https://www.lean.io/ (any other realistic o…
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I have a very basic question about the outputs generated. Are both homotypic and heterotypic multiplets barcode ids in the MultipletCellIds_xx.txt ? If so, how can I find out from the output files of …
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Here's what I get:
`
JK_lesion_raw and JK_lesion are matrix from Read10x
Soup_sample = SoupChannel(JK_lesion_raw, JK_lesion)
Soup_sample = setClusters(Soup_sample, setNames(meta$seurat_clusters,…
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Hi, I got the following error when running DoubletDecon, could anyone give some suggestion? Thanks.
Combining similar clusters...
Creating synthetic doublet profiles...
Step 1: Removing possible …
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I'm working on a Seurat object that has been normalised and scaled and I now want to find the doublets.
```
sceobj
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I am using Seurat version 5.0.1 and DoubletFinder_2.0.3 and encountering this error. Do you have any guides regarding this?
sweep.res.list_data_all