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Hi,
I'm hoping you can suggest what I might to do get a little more out of my HiC data.
I have a HiFi assembly of a ~800Gb diploid plant genome that I have previously assembled using hifiasm. Th…
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Hi Metabuli team,
First of all, I would like to thank you for such an excellent tool, I really enjoy using it. I’m currently using Metabuli to classify my viral metagenome sequences, and I have bee…
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```
As discussed on the forum:
https://groups.google.com/forum/#!topic/ruffus_discuss/ErfMSsKNFB4, this
parameter would specify a folder to put all intermediate/final files. Currently
it can be don…
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Hello,
first of all, thank you for giving us KMC and kmc_tools, which I use frequently. Now I am trying to retrieve contigs from a genome assembly which contain kmers from a database using kmc_tools …
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I've been trying for a bit to get the Jackhmmer batch job to work, but I keep getting the following error from AWS Batch:
`exec /bin/bash: exec format error`
I've spent a bit of time debugging i…
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File format and software port compatibility matrix for bioSyntax.
| | status |
|---|:------------------|
| X | Syntax Complete |
| o | In Development |
| - | Unavailable …
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Hello,
I am trying to run the following code found in your tutorial:
```
library(Tax4Fun2)
physeq %>%
refseq() %>%
Biostrings::writeXStringSet("D:/Home/cobertrand/Desktop/asv.fa…
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Hi,
I am running DAS Tool on conda environment. Not able to figure out what is the issue and how to resolve.
I am getting this error:
DAS_Tool -i concoct_contigs2bin.tsv,maxbin_contigs2bin.tsv,m…
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I'm trying to launch signalP v.5.0, using the command line suggested in Trinotate pipeline, but it seems I'm using it incorrectly and I don't know why. This is my command:
```{bash}
./signalp -form…
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Hello,
I want to try `imrep` with my RNA-seq data. I've aligned the `fastq` to genome with `STAR`, and saved the unmapped reads in `fastq` format (using `--outReadsUnmapped Fastx`). As you said, `S…