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steineggerlab
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Metabuli
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
GNU General Public License v3.0
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New gtdb release 220
#100
FranziNManchester
opened
1 week ago
0
Taxonkit support release
#99
esteinig
opened
3 weeks ago
0
Database for Eukaryotes
#98
DuttaAnik
opened
4 weeks ago
1
--match-per-kmer increasing indefinitely
#97
sean-workman
opened
1 month ago
4
Issue with incorrect virus classification using metabuli binning2report function and suggestion for ICTV taxonomy update
#96
Enkabloza
opened
1 month ago
6
Feature request
#95
DuttaAnik
opened
1 month ago
2
fix: fixed image ratios to prevent squishing when reducing screen width
#94
snjlee58
closed
1 month ago
0
Missing Header and Log File in Metabuli Output
#93
hackerzone85
opened
1 month ago
2
move set() func to ProdigalWrapper.h
#92
jaebeom-kim
closed
1 month ago
0
store redundancy again
#91
jaebeom-kim
closed
1 month ago
0
Redundancy reduction optimization + new DB
#90
jaebeom-kim
closed
1 month ago
0
add extract module to extract reads classified into a certain taxon
#89
jaebeom-kim
closed
2 months ago
0
Update Readme
#88
jaebeom-kim
closed
2 months ago
0
Metabuli v1.0.7
#87
jaebeom-kim
closed
2 months ago
0
refseq_virus/NCBI taxonomy behind current VMR.39 on more than a year
#86
igortru
opened
2 months ago
17
DB search is now 30% faster in Windows OS (in cygwin)
#85
jaebeom-kim
closed
2 months ago
0
Match analysis process became 200X faster in Windows OS
#84
jaebeom-kim
closed
2 months ago
0
Windows
#83
jaebeom-kim
closed
2 months ago
0
Make Metabuli faster
#82
jaebeom-kim
closed
2 months ago
0
Specify multiple fastqs
#81
kazumaxneo
closed
2 months ago
2
Fix a typo that caused a Segmentation fault error.
#80
jaebeom-kim
closed
3 months ago
0
Windows
#79
jaebeom-kim
closed
3 months ago
0
integrate changes in intializing order of LocalParameter made in MMseqs2
#78
jaebeom-kim
closed
3 months ago
0
Disable spacing mask option
#77
jaebeom-kim
closed
3 months ago
0
Add Windows compile in azure-pipelines.yml
#76
jaebeom-kim
closed
3 months ago
0
Disable nedmalloc due to openmp crash in cygwin
#75
jaebeom-kim
closed
3 months ago
0
Disable nedmalloc due to openmp crash in cygwin
#74
jaebeom-kim
closed
3 months ago
0
Database creation
#73
VinaykiyaVridhi
opened
3 months ago
6
Build Metabuli for Windows
#72
jaebeom-kim
closed
3 months ago
0
Performance issue
#71
Maiya19724
closed
3 months ago
4
Segmentation fault when running add-to-library
#70
eh58
opened
4 months ago
1
Fix bugs
#69
jaebeom-kim
closed
5 months ago
0
Segfault in 1.0.5
#68
sjaenick
closed
5 months ago
4
Can't download the database in China
#67
houjialin
closed
4 months ago
4
Bam file as input ?
#66
BenjaminGuinet
opened
5 months ago
1
Question regarding databases
#65
stas-malavin
closed
6 months ago
2
Trying to fix bioconda build error
#64
jaebeom-kim
closed
7 months ago
0
Older database support?
#63
wwood
opened
7 months ago
5
rename db file name
#62
jaebeom-kim
closed
7 months ago
0
Changes in database download module
#61
jaebeom-kim
closed
7 months ago
0
Feature request: support non-GC[AF] accessions
#60
schorlton-bugseq
closed
7 months ago
3
Fixed a bug occuring with sequences containing lowercased bases.
#59
jaebeom-kim
closed
8 months ago
0
Record the Metabuli commit used for database creation
#58
jaebeom-kim
closed
8 months ago
0
Change the message printed when matchBuffer overflowed
#57
jaebeom-kim
closed
8 months ago
0
Metabuli 1.0.4
#56
jaebeom-kim
closed
8 months ago
0
Metabuli for eukaryotes: use cases and future plans.
#55
jaebeom-kim
opened
9 months ago
0
Profiling eukaryote contigs?
#54
timghaly
opened
9 months ago
3
new parameter: --tie-ratio
#53
jaebeom-kim
closed
10 months ago
0
add-to-library for custom db - std::logic_error
#52
lerminin
closed
10 months ago
4
Improved speed by removing unused copies.
#51
jaebeom-kim
closed
11 months ago
0
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