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Some peer-reviewed journals (e.g. Oecologia) require figure panel labels to be _inside_ of plot borders (although they seem to enforce these requirements inconsistently). It would be nice if there we…
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**Describe the Error**
Our pipeline stores the SpaceRanger files in different paths, so I have to provide them manually in createGiottoVisiumObject. Looks like this is broken in current branch.
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Hi Brendan,
I hope this inquiry finds you well, and thank you very much for kindly answering my questions. :)
I'm also trying to validate my cell type deconvolution results by integrating 3 Visi…
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## 1. Bug description
Error message and function fails when trying to format_sumstats:
[E::hts_idx_push] Unsorted positions on sequence #1: 34258488 followed by 34144725
The help doesn't sugges…
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Hi! I wanted to report an error when trying to connect the dots of different conditions when rain.side = 'f2x2'. I followed your vignette explaining how to do it, but I don't know why it looks like th…
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According to my tests `ggpmisc` and `gganimate` are currently not compatible with each other, or please enlight me if I was wrong:
``` r
library(gganimate)
#> Loading required package: ggplot2
l…
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In the heatmaps generated by `plotSim` when a dendrogram is provided, the diagonal elements (= first row in the rotated heatmap) are twice smaller than the other ones. This is because the dendrogram h…
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Hi, thanks a lot for this package!
This is my first time issuing a bug reprot, so please inform me if anything is missing.
**Bug description**
I'm using ggpattern and having a weird bug: in som…
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I get the follweing error running the Joint RNA and ATAC analysis: 10x multiomic tutorial
```r
> pbmc library(Signac)
> library(Seurat)
> library(EnsDb.Hsapiens.v86)
> library(BSgenome.Hs…