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It is interesting to know the implementation of transfer entropy in the analysis of scrnaseq.
Do I need to use:
1. The discretization algorithm which convert the exp in to 0 and 1: if it is, what …
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请问把相关的文件（如：pathway，chrom_LD等）替换成动物的，是否就可以用这个软件在动物上进行gwas和单细胞的整合分析？
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@YingMa0107 @YMalab
I would greatly appreciate your help with this error:
> # Run CARD deconvolution
> CARD_obj = CARD_deconvolution(CARD_object = CARD_obj)
## create reference matrix from scRNAS…
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Strange when I try to use the ImmGen dataset I get that error message but not for the others.
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Hi,
Thanks for making RISC. I am using RISC on big data with 270,000 cells. I got an error as follows when I using RISC on my data. It's seems my data is too large for RISC. Can I just use variable g…
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Hi,
I am using scran / scuttle for scRNAseq normalization.
`clusters
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I am running alevin on the 10X V3 pbmc 1k data set and I am getting a strange warning when running the following command:
```
salmon alevin -i salmon-index/ -p 16 -l IU --chromiumV3 -1 pbmc_1k_v3_fa…
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Hola,
Por favor respondan a este issue con la siguiente información.
* Su usuario de GitHub; ejemplo: `lcolladotor`
* Liga a su repositorio de notas del curso; ejemplo: https://github.com/lcoll…
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Hi,
I have just started exploring RCTD. I have two 10x spatial visium slides from brain area. Each slide with 4 sections. So, total 8 samples. These are merged in Seurat. I will use a reference scR…
gebdu updated
8 months ago
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Hi,
I am trying to use shapeit5 for the first time. I tested the "test" script and it works.
I am getting this error for the output file
`ESC[31mERROR: ESC[0mFilename extension of [/phased_chr/pha…