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some flybase phenotypes are not mapped to their relevant FBbt or any other ontology classes.
for example. there's an annotation between a genotype and the phenotype `adult abdomen & macrochaeta | an…
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Downloaded all-layers.ttl. I guess the same comments apply to other export formats
- please sort statement clusters : first classes, then datatypes, then properties, then individuals, then Source ref…
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We have some default colors for some ontologies in our kgviz stylesheet:
https://github.com/INCATools/ontology-access-kit/blob/e2c76d68a7e72ad847fb3ca7045b23050c4c11a3/src/oaklib/conf/obograph-styl…
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The latest release (2019-11-12) is a big improvement over the previous version. When standing alone, all classes are satisfiable. After being incorporated into vertebrate.owl though, some of them be…
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Need to replace the following postprocessing cypher:
[ ]
```
MERGE (n:Site:Individual {label:'FlyBase'}) ON CREATE SET n.iri='http://flybase.org', n.link_base='http://flybase.org/reports/', n.shor…
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We should consistently adopt a simple subdivision: exocrine gland = acinus + duct
![img](https://upload.wikimedia.org/wikipedia/commons/thumb/4/46/Centroacinar_cells.jpg/500px-Centroacinar_cells.jp…
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While I cannot share the node embedding (for now) since I am gzipping it to upload it on internet archive, in the meantime I can share some visualizations on the TransE embedding made with the GraPE l…
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Analogous to the TransE visualization, but this time with CBOW (first order random walk sampling).
![image](https://user-images.githubusercontent.com/7738570/170890301-461f79c4-4900-49ab-9f6e-7bc3d…
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Sirarat Sarntivijai from twitter @SSirarat 6h6 hours ago
What would be your recommended term for plant's 'gall tissue' (MAT_00003541) if I were to map to PO?
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```
Hi there,
The VIVO ontology and the eagle-i resource ontology (ERO) have been merged into
what is now called the VIVO-ISF ontology.
Can we mark ERO as no longer under active development and in…