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Dear author,
I would like to ask if I have an our own spacer database (collected from binned MAG-based CRISPR arrays generated using CRISPRDetect3.0) and would like to additionally use it to predic…
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Hi @oschwengers!
I have been using bakta in hundred of samples without an issue, but 3 of them crashed in the "predict & annotate CDSs" step.
Information about my setup:
- Bakta 1.5.1 install…
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https://mp.weixin.qq.com/s/YFqLko9q-YYJ9jkhP3Wsww
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Hi,
I have been working with the last version of Sceptre and I am facing this error:
```
Warning message:
In mclapply(argsList, FUN, mc.preschedule = preschedule, mc.set.seed = set.seed, :
s…
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Hello @aaronmck I have been using FlashFry a lot and it's a very useful tool. I am looking to count sgRNAs on sequencing reads (10+ million) that I use as reference sequences for indexing. When runnin…
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Copied below from the other issues here
- [x] Feb 28 Tutorials are in the GTN
- [x] Feb 28: [Record a video](https://gallantries.github.io/video-library/events/smorgasbord2/recording.html) following…
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After reviewing the Biolink Model entities and relations for gene expression data, I have some suggestions.
There is both gene (or protein) expression level data and relative differential express…
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### Project short name:
LineageRecordingCerebralOrganoids
### Primary Wrangler:
Ami
### Secondary Wrangler:
Enrique
### Associated files
* Google Drive:
https://drive.google.com/drive/folders…
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Hi,
I am running VirHostMatcher-Net on multiple fasta files.
After having calculated for each of them the CRISPR values, my analysis was interrupted.
I was wondering if there is a way to proceed wi…
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https://mp.weixin.qq.com/s/1Mi27L6zYCebZvu0wF0kKw