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Dear Developers,
Thanks for introducing such a tool to detect multiplets in single-cell epigenomic data.
I’m completely new to using this tool and have some simple questions. I have successfully…
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Hi,
Running the following command promt an error.
` sweep.res.list Error: $ operator not defined for this S4 class
I have installed the package through the following command:
`install_gi…
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Hi everybody,
I sent out an email earlier today with the first draft of the USPAS paper.
If you read it, you will find many things we should discuss here. Let me start:
Things that are missing:
- In…
ghost updated
8 years ago
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Hello, thank you for the nice tool. Could you provide any example running `Predict_doublets` on a seurat object? It is not clear how I create/encode `marker_array`, `doublets_training`, and `variables…
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Hi,
I have just started exploring RCTD. I have two 10x spatial visium slides from brain area. Each slide with 4 sections. So, total 8 samples. These are merged in Seurat. I will use a reference scR…
gebdu updated
6 months ago
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Hi, when I'm running vireo, I encountered this error:
```
numpy.core._exceptions.MemoryError: Unable to allocate 178. MiB for an array with shape (1939760, 4, 3) and data type float64
```
This hap…
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Dear Heaton
Thank you for the development for this nice tool. I've been totally enjoyed to analyze my samples with Souporcell.
However, recently, I've got very unique sample.
It is embryo cells …
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**Describe the bug**
A clear and concise description of what the bug is.
**To Reproduce**
plot_metadata(
cistopic_obj,
reduction_name='UMAP',
variables=['log10_unique_fragments_cou…
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With the recent qualification of HELIX (https://osu.ppy.sh/b/1584721&m=1), I wonder if it's finally time to have a look at updating/improving the SR algorithm in osu!taiko.
**A bit of background:*…
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### Steps to reproduce
1. Install both ownCloud and NextCloud clients (Ubuntu 20.04)
2. Install nautilus integration for both
3. owncloud right-clic option disappears from owncloud folders in Nauti…