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I made a small test example of `@jbrowse/react-linear-genome-vew` in an app build with [vite](https://vitejs.dev/). Basically I copied over the app code from [here](https://github.com/garrettjstevens/…
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# Manual annotations
- [x] Manual annotation QC
- [x] OGS generation
# OGS remapping
- [x] request whole-genome alignment
- [x] run remap-gff3 on OGS
# Data management
- [x] submit OGS to NCBI
- …
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Up to now I've had a bunch of hacky code in GFFRecordHandler that would make decisions based on what is in the ID attribute and Name attribute. Now, I'd like to regularize all of our GFFs so that the …
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* Ensure when accessing staging.gigadb.org, iframe content still work
* Ensure nginx configuration for live environment production has content policy settings (``add_header``)
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I'm personally not a big fan of not being in control of when a new window is opened; but if there's a compelling reason to have this style of link, then I'd argue we should be consistent about it. Rig…
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Hi, I recently learned to run megalodon with remora model, but came into an error that I don't know how to solve. From the log file, I don't see any error. But the output of the command is very worryi…
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Hi Michael,
I have aligned the mouse genome (mm10) with an unpublished marsupial genome. I have run **chainCleaner**, **chainNet** and I am now trying to run **NetFilteredNonNested** but I'm receiv…
ghost updated
3 years ago
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- JBrowse version: Release 1.16.6
- Web browsers being used: Chrome and Edge
- OS : Ubuntu 16.04.4 LTS for the server serving JBrowse. Windows 7 / Windows 10 for viewing JBrowse in a web browser.…
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In order to support more distros, it would be great to have one of the above. There's surely a way to publish those with a CI at every release. Hopefully it will reduce the size of the executable too …
ghost updated
2 years ago
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Hi, I'm fairly sure it has not gone unnoticed, but just to get updates: the certificate on igv.org expired tonight, which is causing some issues downstream with automation (and possible concern for us…