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Der er blevet rapporteret en fejl i følgende spørgsmål:
* ID: 5bfc5a3882ad7772c64cee96
* Semester: 7
* Sæt: 2012/E…
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I'm launching the follow command line:
```
MacBook-Air-de-Juan:Test_1 JBH$ /Users/JBH/VHIO/Apps/nextflow run -r 1.0.0 nf-core/hlatyping --reads '/Users/JBH/VHIO/Data/*.bam' --bam --index data/ind…
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Hi,
When I try running `hlatyping` with the test profile it works. However if I try passing what I think should be the same inputs as the test profile (for both the bam & fastq) it fails. I'm proba…
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Hi,
I am trying to compiling `scHLAcount` from source code, since the the binary version requires high version of GLIBC.
Here is the code and the error information
```shell
$ git clone git@…
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Hi,
I keep getting this awkward error when I try to run vg construct on the merged vcf file which was called by Freebayes.
Could anyone kindly let me know how to solve this problem.
This is …
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According to the logs everything works fine and records are inserted as designed. But for some strange reason as new records are added old records are removed, from over 2000 successful entries only 3…
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People don't know to use new qual with GenotypeGVCFs so they're wasting a lot of time running the less efficient old qual. There are also people encountering bugs in old qual (see https://github.com…
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See https://github.com/antigenomics/vdjdb-db/issues/251 by @dmstandley
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Hi guys,
Wildtype and Downstream plugins not able to annotated GATK indels vcf file. Amino acid sequences were not generated in VEP processing. Do i need to change any parameter here?
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The user manual and the HLA.Dat file appear to be out of sync. The user manual states that the DT Entry will have 3 per entry. When I look at the 3.30.0 HLA.Dat file, there are only 2 per entry.