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Hi, I tried to run RnBeads in HPC and consistently having an issue. I thought that it is related to the memory issues and I changed the **rnb.cr** as `mem="32G" to mem.size="32G" ` and it seems to wo…
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Please provide as much information as you can:
* **GO term ID and Label**
GO:0036451 cap mRNA methylation
GO:0097309 cap1 mRNA methylation
GO:0097310 cap2 mRNA methylation
* **Reason fo…
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As discussed at the end of last year, we think there should be an 'easy' way to increase the number of RHEA ids mapping to catalytic activities other than me doing it by hand.
Basically,
Scan ontol…
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Dear all,
The proposal has been made to obsolete DNA methylation & children, as well as their regulation terms:
- GO:0006306 DNA methylation
- GO:0032775 DNA methylation on adenine
- GO:0032…
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From geneontology/noctua#880
> @kimrutherford can you look into getting these 2 labels into the GPI?
Which ID should we put in each each column?
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Hello,
many thanks for this tool, it is very beneficial for our research!
I was trying to use it for a BS-Seq experiment but for some reason, I always got no assignation of reads to the two parent …
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Should be a program for that...
sr320 updated
2 months ago
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Hello,
Thanks for all the work on this super important assembly and all the effort to keep annotation organized and easily accessible!
I work on methylation calling algorithms and was very inter…
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Hey @LTLA, thanks for posting that description! I've got a couple questions about the SCE format:
* Where do feature loadings for the dimensionality reductions get stored?
* For `colData` and `row…
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Hi,
Can I apply EpiDISH to esitmate immune cell fractions of WGBS data from liver tumor tissues?
If so, how should I prepare the input and ref data? (I can only find the example for beta value matr…