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Dear Camille Magneville,
I encountered an error when I tried running the example code from 'plot_quality_fspaces.R' below:
```
# Load Species*Traits dataframe:
data("fruits_traits", package = "m…
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Hello, dear ampvis2 developers,
I have been using this package for several years, and cited this package in my paper (https://doi.org/10.1021/acs.jafc.2c01005). This is a good package for me.
Now I'…
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Hello, I have made a scatterplot using rrvgo with the following code in R:
`simMatrixBP
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Can the labels of the output of gl.plot.pcoa be made to represent correctly whether the analysis is a pca or pcoa?
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Canonical (or constrained) correspondence analysis is a multivariate ordination technique. It appeared in community ecology (ter Braak 86) and relates community composition to the variation in the env…
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Handling sparse abundance matrices is tricky because one of the
first steps is to center it, which destroys sparsity. On the other
hand, it could be helpful to use scipy.sparse.svds instead of
np.lina…
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.. based on the minhash distances.
Update: or on gene absence/presence
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Dear mFD authors,
First of all, thank you for developping such a useful R package. I am new to functional diversity and really benefit a lot after going through your workflow.
I tried to calcula…
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I've been reading through the adespatial docs and the cited literature (Dray 2006, and the 3 Bauman 2018 papers) and I continue to struggle identifying what the "global" MEM selection method is doing.…
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This feature, through, experimental, is helpful!
Is there any way to enable it in the current release on pip?
Here's the feature I'm thinking of from another emperor plot.