-
Abundance alteration of nondominant species in fecal-associated microbiome of patients with SAPHO syndrome - Zhen _et al_ - BMC
https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-021-0222…
-
Hi,
Can you confirm if the values are relative abundance and is there a way to convert them into copies per million?
-
```
Compartment volumes cannot be defined as functions that can change in time.
This makes it difficult to model scenarios such as cell growth or endocytosis.
Note that BNG does actually allow the v…
-
#### Problem description
Hi
I have been following the published documentation on the MICOM webpage to create a proper workflow and model manifest for performing analysis and obtaining results. How…
-
Hi,
We are interested in using TSFitPy for estimating isotopic fractions of Oxygen in Hydrogen-deficient Carbon (HdC) stars (these have an unusually high abundance of 18O) by using 12C16O and 12C18…
-
The first example on the [plotAbundance](https://microbiome.github.io/miaViz/reference/plotAbundance.html) reference page asks to plot "counts" assay but the figure is relative abundances. This makes …
-
Hi,
I'm having trouble downloading annotations from MG-RAST. Here's an example of the terminal output I got when trying to download MG-RAST sample ID 'mgm4824985.3'
```
> chordomics::launchApp(…
-
Dear MPSE developer,
Recently I try to use MicrobiotaProcess to do microbiome data analysis. This is a very nice R package as far as I know.
So, I installed it and learn it based on the [documen…
-
I am trying to understand and explain the heatmap figures. I can see what is the difference in `1/2500` and `1/71` ? This is not well captured in the preprint and I was wondering is you can help expl…
-
reinstalled my wsl ubuntu from scratch
reinstalled anaconda, python, docker, nextflow
result:
N E X T F L O W ~ version 23.10.1
Launching `CoPi/main.nf` [sick_banach] DSL2 - revision: 9a59f5b6…