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Hi,
Would there be a problem with the calculation or output if I replace Beagle 4.1 for version 5, which is much faster?
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Hi,
When installing using conda, this version of beagle is installed; beagle.27May24.118.jar. However, the source code (germline.py) indicates that it looks for these two versions of beagle - beag…
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Hey ,
im having a problem with the input vcf/tped, i tried couple of ways with diffrent input file types and always get "error data line" in the first line:
this is exemple of the first line in my v…
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The configuration file beagle.conf should be removed from configs/rpt. This configuration file is associated with chan_beagle which is not included in ASL3.
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Hi,
I'm trying to run SUPERSMART using docker. When working with cladeinfer, beagle appears to be unlinked from BEAST1.7. Is there any way to (i) not require beagle or (ii) install correctly beagle?
…
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Example for building "hello world" does not work as it is missing the board qualifier.
It should be: `west build -b beaglev_fire/ samples/hello_world`
Where `` = `polarfire/E51 or polarfire/u5…
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Hi Jacopo,
I was wondering how much memory BEAGLE usually needs. I have been running into weird situations where the code crashes when I run it on ~40 cores on a very large catalog of ~11000 object…
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Hello!
Thanks for developing this tool! Unfortunately, my results only consist of -nan entries and I am not sure why:
> ind1 ind2 k0 k1 k2 nIter
> 1 2 -nan -nan -nan 4999
> 1 3 -nan -nan -nan …
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The original BeAGLE documentation is located here:
https://wiki.bnl.gov/eic/index.php/BeAGLE
But there is no need to rewrite it on our website, while it might be beneficial to have more document…
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An email from Clarke van Steenderen:
> I am implementing your beastier package in some R workflows, and wanted to find out how to incorporate Beagle into a BEAST analysis? Is this feature function…