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Beta Diversity distances should be stored as some sort of data-base accessible object.
This should be searchable, to limit unnecessary distance calculations and able to return a text-formatted dista…
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Hi team
This is a powerful package and your up-to-date tutorial is very helpful.
I was wondering if you could help with the downstream analysis for functional diversity? https://github.com/gavinm…
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Moreover, we could partition beta diversity into local contributions of specific sites or species contributions following Legendre and Caceres 2013 (http://onlinelibrary.wiley.com/doi/10.1111/ele.1214…
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Is there a way to calculate chao beta diversity for a set of samples with this package?
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Stop mentioning QIIME2 without explaining it. Is it important that it is on this page?
“Everything after the first sentence explains the math/reasoning behind the chart but I still don’t know what …
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Request for function that allows comparison of beta diversity (boxplots) between and within groups.
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Have a separate tab on more technical details on how each beta diversity metrics are calculated.
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Hi,
Happy new year!
Since the relative abundance is recommended to do beta diversity analysis, I used the following codes to transform our phyloseq object to relative abundance. But when I che…
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Hi,
Is there any recent update/possibilities on labeling the sample IDs in the beta diversity plot in qiime2?
Thanks,
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Hello - I am trying to run an sPLSDA showing beta diversity data for 3 different weeks. When the plot is produced the ellipses are correct for all 3 weeks, but the colour of the data points for 2 of t…