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Dear bcbio community,
In 2011, the Harvard Chan Bioinformatics Core began developing bcbio as an open-source framework to tackle challenges in reproducibility and scalability in the field of next-g…
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Notice tracel-ai from burn framework, this software must substitute to high performance predictions, like robotics, predict from data lake. Some molecular pretrained models use RoBERTa as base model, …
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- [ ] GEIS: https://github.com/zakodium-oss/analysis-dataset/tree/main/docs/data/format/biologic/geis
- [ ] MB: https://github.com/zakodium-oss/analysis-dataset/tree/main/docs/data/format/biologic/mb…
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Some people have pointed out that StoX uses biological data from hauls that are marked as invalid. That can cause differences in calculations when compared to our conventional methodology. Could it be…
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Hi,,
First of all, thanks for the great package, it provides very interesting biological insights about my data!
I have two technical questions about plots that compare two datasets:
1. In "netAn…
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### What kind of feature would you like to request?
Additional function parameters / changed functionality / changed defaults?
### Please describe your wishes
Hi scanpy team! I have a rather concep…
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Hello, my data is from the spatial transcriptome. There are three biological repetitions in the experimental group and the control group respectively. Can I use three experimental groups to create a c…
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# Contribution Guidelines
1. **Initial Setup**
- Clone the repository: `git clone `
2. **Update Local Content**
- Ensure you’re up to date with the development branch:
```bash
git ch…
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https://doi.org/10.1101/262501
> Recent advances have enabled gene expression profiling of single cells at lower cost. As more data is produced there is an increasing need to integrate diverse data…
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This is somewhere between a bug and a feature request, but posting in Issues so that hopefully users (and future devs) see it: due to its age, ArchR has fallen behind on some of the references data it…