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Integrated data/metadata in the AK are complete and accurate and that integrated datasets returned from the query API are complete, accurate, and compliant with our adopted standards. An example of cr…
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I can run ggpicrust2 with the provided example data (but not plot it, made a separate entry for that #101) but I am struggling to get it work with my own data.
Here is my code
```r
library(read…
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**Lab Name**: Bioinformatics and Data Science in Biotechnology Lab
**Department**: Biotechnology and Biomedical Engineering
**List of Experiments and Repositories**:
1: Writing and…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
-Note: The package is currently stored on the Lab github but I do the maintenance and…
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https://doi.org/10.1101/262501
> Recent advances have enabled gene expression profiling of single cells at lower cost. As more data is produced there is an increasing need to integrate diverse data…
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### Lesson Title
Snakemake for Bioinformatics
### Lesson Repository URL
https://github.com/carpentries-incubator/snakemake-novice-bioinformatics
### Lesson Website URL
https://carpentries-incubat…
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Hi Reza,
I've noticed that in this version of miRador, RPM normalization is applied by default. While this normalization can be useful, it may inadvertently remove low-expressed fragments that hold…
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I would like to ask if there are existing tools that use this principle for peak lifting, if not, do you plan to build new upstream analysis tools based on this?
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Hi Nico,
I have 3 fastq files from 1 sample (con1), which means I split my input data (con1) into 3 smaller chuncks (con11, con12, con13). Since the limited computation resources, I have to run HiC…
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# Intro
- Problem statement:
* NCBI records vary in quality
* not available for download as a single data set
* annotation not consistent or difficult to piece together
- Previous 16S data…