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## Bug report
### Expected behavior and actual behavior
I would anticipate that passing arguments such as `--minimap2_args '-k15'` would result in the parameter `minimap2_args` being set to t…
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Some annotations need to be manually adjusted in the CSV. I can think of one at the moment:
- `containerImage`
This should always be in sync with the operator image used.
We could add a Makefil…
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Dear all,
The proposal has been made to obsolete
GO:0051767 nitric-oxide synthase biosynthetic proces
GO:0051771 negative regulation of nitric-oxide synthase biosynthetic process
GO:0051770 po…
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Hi idr0130-screenC-annotation.csv is corrupted. Could you please push it again???
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The PANOLY main workflow documentation says I can run analysis with just pome data, no rna/cna required. However, the entrypoint to register data into table (PANOPLY-startup-notebook) seems to expect …
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Please provide as much information as you can:
* **GO term ID and Label**
trehalose biosynthesis in response to heat stress (GO:0090441)
* **Reason for deprecation** Put an x in the appropriat…
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Hi,
Regarding your proposed solution to #651 and the implementation of [simple_join](https://github.com/mlcommons/croissant/blob/5d018154df22f4f496075902d6c4c133c56df3ea/datasets/1.0/simple-join/m…
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When importing salmon quant.sf files, `tximeta` tries to build the matching `TxDb` with `txdbmaker` package. It tries to download the annotation gtf file from ebi
> Import genomic features from th…
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v1.4.0
### Workflow Execution
Command line (Cluster)
### Other workflow execution
_No re…