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**Describe the bug**
botocore.exceptions.NoRegionError: You must specify a region.
**To Reproduce**
Steps to reproduce the behavior:
1. Dockerized seqc for integrating as an app in CyVerse Disco…
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Pankaj suggested that we annotate the variants from this combined VCF file: http://datacommons.cyverse.org/browse/iplant/home/shared/terraref/genomics/derived_data/bap/resequencing/danforth_center/ver…
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- [x] update readme for bayesian network to describe new data products and approach
- [x] include explanation of wget statements in ingestion file
- [x] include syntax of script running
- [x] hypothes…
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**Task to do**
Make SciF solution a CyVerse DE app
**Reason**
Makes the docker SciF image easier to use
**Result**
The SciF solution can be used in DE
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Using the RStudio Geospatial container, clone the NEON-Shiny-Browser into the running instance by using the RStudio Terminal.
```
git clone https://github.com/cyverse-gis/NEON-Shiny-Browser
```
…
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More cultivar information needed from Kansas Experiments. Can be queried in the same way as MAC seasons and may be able to be cleaned using the same code in the CyVerse VICE app.
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Once feedback is received from researchers on transformed seasons 4 and 6 data, can start working on automating data transformations.
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CYVERSE has a bunch of different Dockerfiles/containers to provide computing environments, several of which use Rocker base images:
- https://learning.cyverse.org/projects/vice/en/latest/vice_apps/…
nuest updated
4 years ago
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Create a DIAG community, or group (whichever would better, perhaps just find out what the differences are between), within the Cyverse DE for sharing apps, data, and anything else the discovery enviro…
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Firstly, we appreciate your effort in building NanoDJ and it's an excellent tool for minION data analysis. I have recently built a NanoDJ app in CyVerse Discovery Environment. Here is the link to the …