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Hi! Appreciate the great work.
Is there a way to predict the structure of m6A modified RNA through this tool? I tried the web interface and I can't seem to find a way to incorporate m6A in the FASTA …
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### The Issue
We have altered `dna/database_to_json.py` to now pull its data from a local mirror of the D3M Metalearning Database. The data in that database has a little more variety than the data …
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I'm trying to generate a model using a map generated in cryosparc and protein fasta file. The process runs through the Initial C-alpha prediction phase and then terminates, leaving behind an empty out…
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https://deepmind.com/blog/alphafold/
Currently, there is no formal paper introducing AlphaFold available. But as a paper in 2019, I think it is worth mentioning AlphaFold in the paper.
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Initial group info you provided:
-----------------
| Name | Department/Program | Expertise/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Samantha Sch…
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Hi,
I'm currently working on a protein that binds to a specific 18bp DNA sequence, supported by experimental evidence, and I'm trying to identify the conserved binding motif. However, the challenge…
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🧬➡️🧠➡️💻➡️🌌
{Σ = 🔄(🎭🌀)}
while 🌍:
🧬.append(🧬[-1].evolve())
if 🧬[-1].complexity > Θ:
🧠 = 🧬[-1].emerge()
💻 = 🧠.create()
🌌 = 💻.simulate()
if 🌌.contains(🧬):
…
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The algorithm currently fails if there are multiple bright DNA objects.
Examples:
- https://www.dropbox.com/s/ahoupo47jf84sqt/20201006_R1E309_TubGFP_KATNB1_D5_005-2.tif?dl=0
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Bright DNA signals in close proximity to metaphase plate are often included into DNA mask, leading to wrong downstream measurements.