-
오늘 언급된 내용 중에 HISAT2 의 Exome version 포팅 이슈가 있었습니다.
Whole genome reference graph 에 read mapping 을 하는 것인데,
exome specific 버전이 필요한 이유가 궁금해 질문 드립니다.
-
-
#### Which new datasets are being added with this release?
#### What is the sample breakdown (number of WGS, WXS, RNA-Seq, Panel, Methylation, other)?
https://d3b.atlassian.net/browse/BIXU-3767
…
-
-searching for reference exome (CDS) as a reference for our exome sequence data due to several reasons:
1- when we aligned to one chromosome like chr 20, the alignment rate was v.v low 2.8%
2- whe…
-
Open an exome and the stats look odd. You need to select the default bed to get something more reasonable. Can we auto detect WGS/WES and auto select bed or suggest that the user selects the bed.
-
Hi there,
I would like to apply OFF-PEAK to some targeted EM-seq data (obtained using the Twist Methylome Panel). However, since the tool was designed specifically for exome sequencing data, all ta…
-
@damiansm @julesjacobsen @pnrobinson @drseb
Can you please suggest or make some easy improvements?
Longer term we would like to redirect and/or mirror the Sanger online site but will leave that up …
-
Hi,
I have a baits exome probe BED file, tumor bam and vcf files . I used 8 unmatched normal sampoles to create my NormalDB.
I run all steps in default situation.
However, I think something is not …
-
There aren't enough variants in the 1000g.phase3.100k set for VerifyBamID to work properly for quite a few of the exome samples I've been running. I've generated my own panel using common variants in …
-
Issue by @Anuragksingh, moved from SciLifeLab#763
> Hello,
> I had some doubts over ascat.
> It would be really helpful if you can provide some insights about that.
> Can we use the available…