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Been deleted in @dosumis and @admclachlan's repo so cleared from @Clare72s but should either be fixed or removed from master?
https://github.com/VirtualFlyBrain/curation/blob/master/src/vfb/curatio…
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Hi! Is there a way to auto-detect the driver (and maybe other parts of the spec) of an already existing dataset? I am thinking of
```python
>>> dataset = ts.open({ 'kvstore': 'gs://neuroglancer-jan…
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Have a `UseLabels` option for nblast, which would work similarly to `UseAlpha`. Labels could be numeric (2) or character ("axon").
Some sample `dotprops` data from the hemibrain, two sets of cells…
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Hi Chris,
I am wondering if this can in anyway extended to pull data from gs://precomputed files that are publicly available (e.g., HemiBrain).
It would be super helpful if we can:
- load gs://…
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Hi,
I'm trying to load some of the Janelia hemibrain EM image data but run into this issue:
```Python
>>> vol = CloudVolume('precomputed://gs://neuroglancer-janelia-flyem-hemibrain/emdata/clahe…
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```
> hcm = hemibrain_compartment_metrics(neurons,
+ resample = NULL,
+ just.leaves = TRUE, # just look how much the leaves of skeletons overlap, quicker (default)
+ delta = 5)
> hcm
…
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It appears to randomly select left or right ROIs.
![image](https://user-images.githubusercontent.com/112839/84012804-04ca0080-a970-11ea-841f-c57150d8374c.png)
=>
![image](https://user-images.g…
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This could be useful in the case where we want to add metadata for data.frames containing NAs.
One use case could be a dataframe containing hemibrain matches for catmaid skids. Some rows might not ha…
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Different clusters are returned when comparing interactive plots vs. exported plots
Code:
```
library(coconatfly)
library(dplyr)
mbon_ids
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Hi all,
Thanks for the wonderful package! On Python 3.9.2, on MacOS Big Sur on an Apple Silicon chip with SciPy 1.6.1 and numpy 1.20.1 the find_objects function is using so much memory that it's g…