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Mirror of: https://github.com/monarch-initiative/monarch-mapping-commons/issues/11
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@pgaudet @kltm
When you check the box for “compare ortholog genes” in the Function-go annotation section:
If it is from a mouse gene page, the mouse ribbon stays, but all the boxes become blank.
…
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Hi, currently the formatting of SPARQL queries aligns predicates/objects based on the length of the subject, e.g.:
```sparql
PREFIX rdfs:
PREFIX skos:
PREFIX up:
SELECT DISTINCT ?diseaseLa…
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Many terms
MONDO:0013519
A dyskeratosis congenita that has_material_basis_in an autosomal recessive mutation of NOLA2 on chromosome 5q35.3.
NOLA2 = NHP2
MONDO:0009136
Definition
A dyskera…
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Hello,
I am using Enrichr in "R" for my pathway analysis. It is not references in the package description https://cran.r-project.org/web/packages/enrichR/enrichR.pdf how to define the background in…
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**Describe the bug**
Currently, mehari does not annotate tx on the MT chromosome.
```
curl 'http://mehari:8080/seqvars/csq?genome_release=grch37&chromosome=MT&position=73&reference=A&alternati…
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Hi Great tool thanks for maintaining it.
i have a question that relates to the lack of mitochondrial genome encoded genes and their corresponding ontologies.
In the following code:
```
hgnc
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In http://identifiers.org/hgnc/ we see Identifier pattern `^((HGNC|hgnc):)?\d{1,5}$` which is (somewhat) reflected in the HGNC Accession number entry https://github.com/bridgedb/BridgeDb/blob/master/o…
stain updated
7 years ago
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There is inconsistency between gene_details/gene_summary GEMINI version 0.21.1 and current HGNC nomenclature.
For example, we have gene name ADA2 in the GEMINI SQL query but in the variants table it…
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- [x] 1. The first should use a `/` not a `:` according to Mondo practices (http://identifiers.org/hgnc/30225).
- [ ] 2. The second should probably be connected with and a literal value of the s…