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Hello,
Thanks for the great package!
I am trying to extract the fragment count matrix to implement with the following notebook:
https://github.com/aertslab/pycisTopic/blob/old/notebooks/Toy_m…
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Thanks for the awesome algorithm and package.
I wonder if the algorithm could possibly be used to cluster based on one variable/feature.
For example, if I use `d=1` in the `spatialCluster` func…
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Project UUID: 8c3c290d-dfff-4553-8868-54ce45f4ba7f
Project Title: Melanoma infiltration of stromal and immune cells
Project Short Name: Mouse Melanoma
Submission UUID: 4756b97c-3666-4ff0-9c48-611d…
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Completed
- Breast
- Colon & Rectum
- Lung & Bronchus
Next
- Prostate
- Corpus Uteri & Uterus, NOS
Later
-Non-Hodgkin Lymphoma
- Bladder
- Kidney & Renal Pelvis
- Melanoma of the Skin
…
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Thank you for creating such a wonderful software!
I immediately installed SpatialDM and tried running melanoma.ipynb, but I got an error.
https://github.com/StatBiomed/SpatialDM/blob/main/tutorial…
yuifu updated
3 months ago
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Trying to submit the cutaneous melanoma guidelines (e.g. for [AID 7](https://civicdb.org/events/assertions/7/talk/revisions/list/32373/summary)) is not a valid value. The list of [guideline documents …
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**Describe the bug**
When scraping pages, randomly get this error:
`Could not parse response content as the request was rejected by the content filter`
```
response = self.root_client.beta.cha…
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I am trying to align a 'table1' to the center but the align = 'center' is being ignored. I changed the output from 'text' to 'latex' or 'markdown' as described on the function but it still doesn't wor…
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Hi,
Thanks a lot for the tool! However, I found that the following fails
```
library(DAseq)
labels_res
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Hello,
Optitype package (toolshed.g2.bx.psu.edu/repos/jjohnson/optitype/optitype/1.3.2) was installed into a local galaxy server from the toolshed. It was run on the paired-end data in the DNA mode…