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Hi, and thanks for the project.
We have a metastasis project in which we sample from different physical sites -- which we call regions -- but it is very plausible due to metastasis that mutations wil…
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# Mods to add
## Singleplayer
- [x] 1187: Episode One
- [x] 1187: Rogue Train
- [x] A Frayed Stitch in Time
- [ ] Aberration
- [x] Awakening
- [ ] Baryonic Predicament
- [x] Black Snow
- …
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It would be nice if we could add some auto-ordering of groups on the comparison page. A few simple rules could help:
- [ ] primary should be before metastasis (see e.g. [this example](https://www.c…
inodb updated
8 months ago
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Establish a pipeline/method to link type of metastasis to cell type proportions.
(For example, Patients with Distant Mets (non-lymph node), seem to have much higher proportion of Endothelial cells.…
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Unfortunately, the sample extraction is not linked to the file search which results in unexpected behaviour, e.g.:
* You have matchExactSampleNames=true
* But you will get several bam files matching…
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- Recurrence
- Progression
- Metastasis
See here prior/related work:
https://www.eurekalert.org/pub_releases/2019-07/dci-nat072319.php
https://ascopubs.org/doi/full/10.1200/CCI.19.00013
https:…
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Hi,
I 'm interested in the research "Breast cancer metastasis: immune profiling of lymph nodes reveals exhaustion of effector T cells and immunosuppression". But I can't find related code or data i…
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Hi,
I wonder is there a way to output only one result with the highest score for each detected entity? For example,
```
sents = ['metastatic disease']
concepts,error = mm.extract_concepts(sent…
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Hi Andrea,
First of all, thank you for developing this amazing tool for CINSARC analysis! I am using this package to test CINSARC as a tool for sarcoma prognosis, and therefore I want to validate i…