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In cell hashing or CITE-seq datasets, an additional count matrix is produced and it stores how many ADT/HTO barcodes (see this for details https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13…
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https://mp.weixin.qq.com/s/uFnLrEz7aVqtDa9TftJlRw
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https://mp.weixin.qq.com/s/uFnLrEz7aVqtDa9TftJlRw
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https://mp.weixin.qq.com/s/YnO9IeNfvqcJq4gcNWaxeA
ixxmu updated
6 months ago
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**Describe the bug**
The dev version of AnnData does not provide `compat.Literal` anymore, therefore import of mudata fails.
**To Reproduce**
```ipython
!pip install git+https://github.com/scve…
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Disclosure: I'm a maintainer of the Orchestrating Single Cell Analysis with Bioconductor book (OSCA).
Hi,
I've just started reading your guide and look forward to learning more about the Python-…
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I've tried installing within qiime2-2019.7 conda environments both on a cluster (barnacle) and on my local machine, I get the errors when I try to refresh the cache. I've also tried install mmvec alon…
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https://mp.weixin.qq.com/s/-VAb0bm3fqTcPYJUAkSzAA
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### Week 1 - Get to know the community
- [x] Join the communication channels
- [x] Open a GitHub issue (this one!)
- [x] Install the Ersilia Model Hub and test the simplest model
- [x] Write a motiva…
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