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Example (12119723):
- Native: https://github.com/virtualcell/vcdb/blob/main/published/biomodel/omex/native/biomodel_12119723.omex
- SBML: https://github.com/virtualcell/vcdb/blob/main/published/biom…
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libOMEXMeta focuses on specific identifier namespaces. One benefit of this is the ability to check that identifiers are valid. It would be helpful for libOMEXMeta to take advantage of this to weed out…
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Without error, I am able to call:
`docker pull {copasi image str}`
However, when calling:
`docker run {copasi image str} -i {path to omex}
-o {path to output}`
I am greeted with the follo…
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pyomexmeta declares several namespace prefixes which don't obviously appear to be used in documents.
For example, this
```python
from pyomexmeta import RDF
rdf = RDF()
with open('BIOMD000000007…
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All models from biomodels had their annotations extracted and put into rdf files. Create the equivalent omex files that combine the rdf file and associated model. Send biomodels a link to the list of…
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Example: https://github.com/virtualcell/vcdb/blob/main/published/biomodel/omex/sbml/biomodel_12119723.omex
The archive has 6 SBML files, but the SED-ML only simulates 3. The native version, only ha…
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@SunnyXu Can you attach the OMEX file with the log axis that didn't work?
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Presently, NEURON and PySCeS cannot be used together a single Python memory space, likely due to their shared dependency on SUNDIALS.
The Dockerfile below illustrates the problem. Building this res…
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**Exoplayer Version: 2.17.1**
**Android : AOSP 10**
**Custom Streaming application**
**Using our own OMEX implementation**
**App is in tunneling mode**
I have been trying to debug an issue wher…
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