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I am trying to use LDpred-funct in order to generate a polygenic risk score from a summary statistic. I am following the tutorial reported here but I have some questions:
At first, I used S-LDSC in…
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Hi Sam,
Thanks for the great tutorial. I have been trying PLINK for the polygenic risk score. However, with the height dataset and EUR plink files, I am not able to reproduce the results. Especially,…
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Hi! Thanks for using the PGS Catalog calculator (`pgsc_calc`).
If you need help with setting up the calculator, configuration options, or have questions about polygenic risk scores generally, the …
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### Description of the bug
Hello, first of all, congratulations on creating such a comprehensive tool like pgsc_calc. I have been trying to set up the analysis and encountered an issue that I don't u…
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Hello~ We are performing meta-analysis with mtag but get an output file without the N column. Is there any setting we can obtain it? The MTAG codes are listed as follows:
./mtag.py \
--force \
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I plan to calculate a gene expression risk score using the method described in the paper below.
[`Oliver Pain, et al, Imputed gene expression risk scores: a functionally informed component of polygen…
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貼吧活動：(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
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Hello,
I am currently following a PRS (Polygenic Risk Score) calculation tutorial, and I have encountered a situation where:
a) I successfully generated the best PRS when considering the entir…
hxckk updated
9 months ago