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**Description:**
We are trying to visualize the reads from SARS CoV2 samples on the gnome terminal. Upon uploading the sample file we see the following error.
> **Error encountered querying alignm…
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Is the training source code available? We want to refer to your [article](https://doi.org/10.3390/ijms232314683) in our paper as a baseline for SARS-CoV-2, comparing our results (not out yet) with you…
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I worked a bit on the labelling matching with ENA / NCBI as I had a lot of mismatch issues with the development of the FAIR Data Station. I forked the repo and did an analysis on the terms in MIxS and…
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**Is your feature request related to a problem? Please describe.**
We need to run SARS-CoV-2 through SneakerNet
**Describe the solution you'd like**
A new workflow with new plugins
* Amplicon-…
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We need to annotate manually-curated molecules with the following information:
- Target: mPro, Spike, ...
- Phenotypic Assay: 0 or 1
- Target Assay: 0 or 1
- Docking: 0 or 1
- IC50: value in uM…
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@k-florek @fanninpm @erinyoung @tives82 @DrB-S
I have been using Cecret for all things SARS-CoV-2 and our research lab just started to work up a NGS methodology for Human Norovirus sequen…
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from: https://github.com/sars-cov-2-variants/lineage-proposals/issues/1603
![image](https://github.com/user-attachments/assets/841ee3cc-f216-487f-bcd9-ad1ccb1c7ce4)
tree: https://nextstrain.org/fetc…
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Hi @GemmaTuron ,
As agreed, we should check the REDIAL model (or any other SARS-CoV-2 model that we have in the hub) and run it in our chemical spaces.
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:cool:
### :pushpin: Explain the Request
Some GenBank accessions are unable to be downloaded via the command we currently have in the Assembly_fetch workflow:
```
datasets download genome ac…
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From branch 8 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1.4.5+C28948T+S:F456L, further gets R346T and S31F
Query: C28201T, T22928C, T22926C, C28948T
No. of seqs: 2…