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From branch 21 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1502
and branch 4 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1771
This used to be a UK clu…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1825
KP.3.1.1+T15567C, A23723G(S:S721G)
GISAID query: T15567C, A23723G, C12616T
No. of seqs: 63(Australia 1 Austria 1 Denmar…
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from: https://github.com/sars-cov-2-variants/lineage-proposals/issues/1983
tree: https://nextstrain.org/fetc…
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There is a new branch of KP.3.3.3 with 31del tracked first in the comments of #1700:
Kp.3.3.3 > Orf1a:T654I ( C2226T) , T20784C, S:S31del (del21653-55)
Query C2226T, T20748C
Samples : 12
Places: 3…
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Add link of protocols.io for crystallization of SARS-CoV-Mpro in the last TEP.
https://www.protocols.io/view/crystallization-of-sars-cov-2-mpro-kqdg326y7v25/v1
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Spotted on bubble-up: the page for `/` is slow, but seemingly only with a few specific orgs - worst offender is `/investigating-events-following-sars-cov-2-infection/` , with `opensafely-internal` run…
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### Feature Request
We are reaching our CPU limit for our production Terra workspace. This is negatively impacting our pipeline and preventing us from reliably meeting dashboard updates.
This is…
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We should this link to the protein production of SARS-CoV-2 Mpro TEP section
https://www.protocols.io/view/sars-cov-2-mpro-small-scale-expression-and-purifi-rm7vzj8p8lx1/v1
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:cool:
### :pushpin: Explain the Request
Nextclade datasets currently used in TheiaCoV defaults are outdated. Update to use the most-recent datasets for Flu & SC2 analyses. It looks to be that we a…
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https://onlinelibrary.wiley.com/doi/10.1002/jmv.26684
Challenger combined dataset (see Study 15)
[CombinedDataset.xlsx](https://github.com/user-attachments/files/17624541/CombinedDataset.xlsx)