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Hi,
I am trying to use caiman to get a initialization file so that I can reuse it in the future. I am passing in a tif file generated from a sequence of avi file, and the error message that i get …
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Sgr_A_st_h_03_TM1
[uid://A001/X15a0/Xca](https://almascience.org/aq/?result_view=observation&mous=uid://A001/X15a0/Xca)
* [x] Observations completed?
* [x] Delivered?
* [x] Downloaded? (specify wher…
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At the moment, we have the microscope collect data as quickly as possible. In the Ultima Investigator's case, this happens to be quite close to 30FPS.
The end result of this is that our data in the…
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Hi!
First: Thanks for your great work!
I am currently trying to optimize suite2p on our new AMD 64 core server (fresh conda/suite2p install on Ubuntu 5.4, w/ standard environment dependencies).…
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Evaluate
SLAW: A Scalable and Self-Optimizing Processing Workflow for Untargeted LC-MS
https://pubs.acs.org/doi/10.1021/acs.analchem.1c02687
and check if our novel workflow closes some of the gaps …
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Hello,
I have recently installed the latest version of suite2p on my imac (OS 10.13.6) and I am getting an error right at the end of running suite2p, shortly after the combined view is created. Despi…
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### Describe the issue:
I'm using Kilosort 3.0 to do spike sorting on data from a Neuronexus A4x4 CM16LP probe.
With the parameters I have right now, Kilosort is only detecting 8 units and only …
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Sorry if I'm missing something obvious, but the deconvolution [implementation](https://github.com/MouseLand/suite2p/blob/main/suite2p/extraction/dcnv.py) appears to be quite different from the origina…
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First, thanks a lot for making neuroconv and roiextractors. I just started today and it was incredibly easy to use -- I got things working really quickly with it. I have an annoying question about n…
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hello, Thank you for wonderful tool to deconvoluting tumor specific expression count!
i have 84 patient of match Normal and tumor RNA-seq raw count.
so, 84 normal and 84 tumor .. with 55882 of …