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Pims cannot download `loci_tools.jar` when using bioformat, it seems it does not exist since version version 6.9 of bioformat:
(see https://downloads.openmicroscopy.org/bio-formats/6.9.0/artifacts/ )…
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maybe that solves later automatically, when trackpy improves
https://github.com/soft-matter/trackpy/issues/610
till then, we use again one core only. booohhhh
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It seems the `field_in` isn't used in `linking_trackpy` which only uses the features to link data
https://github.com/tobac-project/tobac/blob/4b9c79857dc9ad17692c6919c44fd02fcbf83cd5/tobac/themes/t…
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From a discussion between me and @wreckdump in #320, we should document that sometimes `trackpy` hangs on tracking when `subnetwork_size` is too large. I've had trouble reliably replicating this, thou…
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https://github.com/spacetx/starfish/blob/47de54081c61e68932364a7fb53ed0f6cb5752b5/starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py#L134
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I had quite a struggle making an app recently with fbs because I am using the package TrackPy. The app would start smoothly with ```fbs run``` but keeps crashing after the ```fbs freeze``` was complet…
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Hello,
I just began to use trackpy to follow cells during migration.
unfortunately, an error occurs when I run the code. It runs in loop because of a runtimeerror on the tp.batch and I have no i…
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I am using trackpy.locate (or rather, .batch) and then .link to form trajectories, which are then processed even further.
This includes calculating the volume of the 2D gaussian for each feature foun…
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Lately, I ran into a problem when using the relate_frames() function. Below a small part of the frames I wanted to analyze:
When I use the relate_frames() function, it only works for a few comb…
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@danielballan @nkeim @tacaswell I pushed trackpy v0.2.4 docs and changed the folder names to exactly resemble the GH tags. For the next release of trackpy, the docs will be automatically generated und…