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Add current monarch level so people can see who is at what level. This might encourage gamification within the app.
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We will likely have users wanting to cite organism and in vitro resources from Monarch.
We should highlight the RRID portal on the homepage.
We can also add the correct nomenclature for citation "R…
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Moving this from JIRA. @DoctorBud @kshefchek @kltm any ideas?
Log file here:
https://bamboo.crbs.ucsd.edu/download/MON-STMONARCH-JOB1/build_logs/MON-STMONARCH-JOB1-81.log
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[ https://support.c…
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https://github.com/monarch-initiative/mondo/tree/master/src/ontology/mappings
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Summary: Most of these sources now have links TO Monarch, but many do not have hyperlinks FROM Monarch yet. Most are listed on Monarch pages, but are not hyperlinked (See https://github.com/monarch-in…
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- [x] Re-dedeploy the beta site
- [ ] Fix unmatched phenotype bug (https://github.com/genome-one/monarch/issues/3#issuecomment-310798608)
- [ ] API improvements (https://github.com/genome-one/monarc…
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We should come up with a new strategy for maintaining and using a Monarch LinkML Schema.
Options include (in no particular order of preference/usefulness):
- Creating a `monarch-data-model` repo …
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There was a blog post from MONARCH detailing how to parse the MONDO data to get "rare" disease classification
https://mondo.monarchinitiative.org/pages/analysis/
Jim Balhoff rewrote this blog post…
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... despite the existence of XPO:abnormal circulatory system.
@rays22 can you check if XAO: circulatory system is mapped to Uberon:circulatory system, and if not add that mapping to Uberon?
Some…
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As part of our [genotypes and variants super ticket](https://github.com/monarch-initiative/monarch-app/issues/715) we identified that we want to confirm that our pipeline that brings in genotypes from…