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This is a bad one. See https://github.com/bigdatagenomics/adam/blame/master/adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala#L88-L93. However, what's weird with th…
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Hello,
I tested bcbio on exome data. And there's a some difference on GATK's best pratice 's recommendation.
One is that the base quality score recalibratation step, in bcbio, it's earlier than rea…
pl618 updated
7 years ago
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Also, somehow, my litemods don't appear on logs, be ensured in that.
```
---- Minecraft Crash Report ----
WARNING: coremods are present:
Inventory Tweaks Coremod (InventoryTweaks-1.63+beta.1…
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add option to NOT create a file lock. Most common with vcfMerger's variant annotator.
--disable_auto_index_creation_and_locking_when_reading_rods
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```
---- Minecraft Crash Report ----
WARNING: coremods are present:
Inventory Tweaks Coremod (InventoryTweaks-1.63+beta.108.jar)
BetterFontsCore (TTFR-1.12.1-1.9.1.jar)
Contact their author…
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Je suis tombé la dessus today.
https://leanpub.com/vuejs2-french/c/MajestyOfVuejs2Discount
Je sais pas dans quelle mesure ce livre peut aider ou non, mais je note que les auteurs on appelé la "…
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L'adresse du proprio n'est pas correcte, cf capture d'écran.
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Hi,
I run rhino data according to the workflows ( http://www.htslib.org/workflow/ ).
I use the below command
"java -Xmx2g -jar GenomeAnalysisTK.jar -T RealignerTargetCreator -R ref.fa -I lib_sorted.…
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Right now they have very long and impenetrable names, the same as their filename; they should be readable/understandable.
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Hey Christian,
when running the pipeline, the realigner throws this exception. Somehow the version of the nipy.SpaceTimeRealigner doesn't match the required one. How do I get rid of this?
Very b…