-
Dear all,
after mentioning a few times that there are some issues with non-consistent vocabulary usage I finally read all sdrf tables and compared all labels/column-names (using my R package wrProt…
wraff updated
2 years ago
-
This repo contains a lot of custom code when parsing files/string and putting it back together. I strongly believe that this is a sure way to have weird file input pass validation testing, besides oth…
-
It seems that MassIVE does not provide download links for its resources over HTTPS, but it is still possible to download resources over HTTPS from the website (e.g. [MSV000080374](https://massive.ucsd…
-
### Description of feature
The recent version of `sdrf-pipelines` fails for the following SDRF in multiomics `PXD008440.sdrf.tsv` with an error empty columns values, which is not the case.
-
I already have an URDF model and it have 6 joints. My last link is flange, and now i want to build a eef_link to change the reference of the flange to my new tool. I try to create a tool insede my urd…
-
I couldn't find it mentioned/referenced anywhere in this repository. That's why I wonder if it serves any purpose at all.
-
### Description of the bug
We have a major `bug` @qinchunyuan @jpfeuffer since the DIA-NN message has been added for conda (which I think is great), now the entire pipeline do not work with conda. I …
-
@daichengxin the dependency introduce: pyecharts is stopping the project to be built in conda because this dependency is not in Conda. Can we use another library for this that at least is in conda-for…
-
**Describe the bug**
When running the hca-to-scea tool, I run into the following error:
```
Traceback (most recent call last):
File "hca2scea.py", line 584, in
main()
File "hca2scea.py", lin…
-
### Description of the bug
Following advice from @jpfeuffer, I'm making the switch from the "nf-core/proteomicslfq" workflow to "nf-core/quantms" (dev version in both cases). I'm surprised to find th…