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Hi,
I am now using micapipe to process my functional MRI. I found an error in ICA-FIX
`No valid labelling file specified` ,
When I checked the log file, I found it was due to the R error:
![imag…
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It appears that this function does not scale well when run on a cluster.
Notes from my most recent attempt:
- The code I ran is here: https://github.com/related-sciences/ukb-gwas-pipeline-nealel…
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Once it is accepted, we need to inform UKB about it. I believe @AlisaDK is responsible for that.
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Hi,
I am trying to perform a multivariable MR with my own summary exposure data, but I am not sure whether I am doing it the right way, and I keep receiving an error about my data.frame. However, I…
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Similar to https://github.com/pystatgen/sgkit/issues/80, we need a better way to store genotype probabilities and/or dosages from bgen. UKB chromosomes stored as 32-bit dosages in zstd compressed zar…
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I'm testing whether MTAG can help with polygenic risk score prediction for a pair of traits with poor genetic correlation. My primary phenotype is bipolar disorder (BIP), and I performed MTAG on BIP v…
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I'm trying to run snpnet on UK Biobank data with 340K indivs and 500K variants (pgen is only 22GB).
I use nodes with 16 cores and 128 GB RAM.
I have tried to use parameter `mem` (trying 128000, 1000…
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Hi,
On the readme page of this github, there are some example commands for running gsa-mixer
For --gsa-base, the input parameters include:
--go-file go-file-baseline.csv \
--go-file-test go-fi…
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Hello,
I was running pwas for my own dataset, without providing a covariate file for the test run, and I have trouble solving it myself.
I ran into this error, I wonder if it's because I didn't …
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checking
lei-8906-ownpt/freeling/art-ab.out
I understand that:
1. privativo http://wnpt.brlcloud.com/wn/synset?id=02152985-a
2. postulação 06513366-n
3. juizado
4. impetração
5. constitutivo a…