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Breaking when bumping versions for monarch-ui, perform to lower or to upper for track type enums.
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**Describing the issue**
When I change the quant to "LFQ+MBR" in the search task and open it again, it has reverted to "LFQ" evefytime.
**Reproducing the error**
Should happen if you try it. In c…
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Hi
@thomaspd (isoform discussion)
The two different specific isoforms of a protein (ex:P00973-1 and P00973-2) used in a model are not displayed in the graphical view, only the gene name is displaye…
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### Operating System
macOS
### Other Linux
_No response_
### Workflow Version
v1.2.1
### Workflow Execution
EPI2ME Desktop (Local)
### Other workflow execution
_No response_
### EPI2ME Versi…
jh4yd updated
1 month ago
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Hi,
I have two questions regarding the exon bed file. Would appreciate your time and help in this.
1. Should I provide non-overlapping disjoint exons for a gene OR all the exons from gencode gtf f…
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Hi!
I have some questions about rmats.
Why are there no SE events or MXE events in my results?Are these related to the fact that the intron of the research object is only 15 to 17bp?
python ~/mi…
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In b6b9d534da028509, my protein binding phenotype annotation demanded both two assayed proteins AND two assayed isoforms, because the configuration file has (well, had) cardinality 2 for both entries.…
mah11 updated
8 years ago
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Dear Vadim,
I am trying out a insillico library generated by alphapeptdeep. The library is about 14 GB size. I generated it with carbamidometh and dimeth light as fixed mod and protein n-terminal a…
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Hi,
I tried executing abundance_estimates_to_matrix.pl as follows, and everything looks fine (or at least I can`t spot any error messages). But there are no matrix files anywhere on my system.
…
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