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Sten, just a quick check: I assume we'll use the same licence as [`loompy`](https://github.com/linnarsson-lab/loompy/blob/master/LICENSE), that is: BSD 2-clause "Simplified" License"? If so I'll just …
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I'm trying to use loompy, but it fails to load. I've installed it using pip3 (`pip3 install loompy`). When I import it, I get the following error.
```python
>>> import loompy
Traceback (most rece…
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My Training file
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Haile WB, Gavegnano C, Tao S, Jiang Y, Schinazi RF, Tyor WR: The Janus kinase inhibitor ruxolitinib reduces HIV replication in human macrophages and ameliorates HIV encephalit…
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All of my gene and cell metadata is stored as pandas dataframes and it's a pain to have to convert those to dictionaries every time for `loompy`. Can `loompy` simply accept Pandas dataframes for these…
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**[ UUID ]** 65cf358c-baed-4d55-b29e-f1faeb7b9dfa
**[ Session Name ]** The Data Neuroscientist
**[ Primary Space ]** Open Innovation
**[ Secondary Space ]** Decentralization
**[ Submitter's Name ]*…
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Trying to create a `loom` dataset here and am getting errors after I convert my `pandas` DataFrame of cell/gene attributes to a dictionary. I suspect that since `pandas` does object arrays instead of …
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Hi,
I am a Msc student in the faculty of neurobiology in Haufa University,
My research deals with the topic of PyN cluster analysis by morphologic parameters and SP,
first of all, thank you for sh…
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This is not really a bug in syncthing, but one in windows / ntfs to be aware of and (maybe) to work around:
Pathnames in NTFS are usually restricted to 256 chars (260-4: 'C:\' in the beginning and \N…
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pl-ki updated
6 years ago
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Dear Linnarsson Lab,
do you think it would make sense to build a loom file export into [Scanpy](http://scanpy.readthedocs.io)? I haven't thought too much about the file format for Scanpy's [AnnData c…