linnarsson-lab loom-viewer issues

linnarsson-lab / loom-viewer

Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format

BSD 2-Clause "Simplified" License

35 stars 6 forks source link

issues

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loom-viewer doesn't open

#166 MahdiMoradiMarjaneh opened 4 years ago
4
Updated npm packages and deprecated webpack plugins/configuration.

#165 prete closed 4 years ago
0
Fix command denomination on string 25

#164 kant closed 5 years ago
0
site-packages/loom_viewer/static missing after pip install

#163 kgerman73 closed 4 years ago
2
Error while trying to view the loom file

#162 araksm closed 6 years ago
7
Add pillow to dependencies

#161 marcelm closed 6 years ago
2
Fetch failed, checking IndexedDB cache

#160 NaomiBreslin opened 6 years ago
2
Fixed deprecated import from gevent

#159 ivirshup opened 6 years ago
2
`ModuleNotFoundError: No module named 'gevent.wsgi'` on any invocation of `$ loom`

#158 ivirshup opened 6 years ago
3
Automatically remove server cache for non-existing loom-files

#157 JobLeonard opened 6 years ago
0
Update file metadata cache if folder name changes

#156 JobLeonard closed 6 years ago
0
Use RBush for point detection

#155 JobLeonard opened 6 years ago
1
Investigate accessible-autocomplete as an alternative to react-select

#154 JobLeonard opened 6 years ago
0
Size of heatmap/categorical buttons can be broken

#153 JobLeonard opened 6 years ago
0
reminder: send email to group when upgrading

#152 JobLeonard opened 6 years ago
0
Scale disappears in sparkline view

#151 pl-ki opened 6 years ago
2
Tooltips in sparkline view

#150 pl-ki opened 6 years ago
0
HTTPS

#149 JobLeonard opened 6 years ago
0
Document conventions for special attribute names

#148 JobLeonard opened 6 years ago
0
Custom color schemes

#147 JobLeonard opened 6 years ago
3
Download loom file improvements

#146 JobLeonard opened 6 years ago
3
Remove reliance on getImageData in scatterplot

#145 JobLeonard opened 6 years ago
0
Better number rounding in JSON array conversion

#144 JobLeonard closed 6 years ago
1
Helper functions for listing/creating/opening loom files in the loom-datasets folder

#143 JobLeonard opened 6 years ago
0
In Cellscatter view, Use 'ClusterName' if they exist instead of 'Clusters' for labelling

#142 pl-ki closed 6 years ago
1
Color all cell clusters even when they are > 20

#141 pl-ki closed 6 years ago
4
Potential conferences to apply to

#140 JobLeonard opened 6 years ago
4
Getting `loom` to work from the Windows command line

#139 JobLeonard closed 6 years ago
6
Export selected genes to CSV

#138 JobLeonard opened 6 years ago
8
prepare_heatmap() wasn't fully updated

#137 JobLeonard closed 6 years ago
3
Sharing URL replaced with "undefined" when opening a dataset twice

#136 JobLeonard opened 6 years ago
0
Better averaging strategy for heatmap tiles

#135 JobLeonard opened 6 years ago
1
error at "tile" step, do not see all data in chrome

#134 eLinanin opened 6 years ago
15
Set up robots.txt, etc for search engines

#133 JobLeonard opened 6 years ago
1
Generate new `cortex.loom` with correct row order

#132 JobLeonard closed 6 years ago
1
Favicon

#131 JobLeonard closed 6 years ago
0
mental note: explore prune-clustering

#130 JobLeonard opened 6 years ago
0
Question regarding Loom CLI

#129 JobLeonard closed 6 years ago
4
License

#128 JobLeonard closed 6 years ago
2
Figure out blocking CSS problem so we can get the latest version on pip

#127 JobLeonard closed 6 years ago
1
Tells me to use Chrome instead of Safari...but I'm using Chrome

#126 jamestwebber closed 6 years ago
12
[scatterplot] "lock ratio" option for x/y attributes

#125 JobLeonard opened 6 years ago
0
[scatterplot] ignore inappropriate settings when using string-based attributes

#124 JobLeonard opened 6 years ago
0
paint.directly()-related bugs in sparkline

#123 JobLeonard closed 6 years ago
1
[sparkline] avoid awkward small, uneven grouping, and confusing column stretching

#122 JobLeonard opened 6 years ago
0
Safari bug

#121 JobLeonard opened 6 years ago
0
Some columns missing in Cell Metadata view

#120 slinnarsson closed 6 years ago
3
Some numerical attributes are shown as text and vice versa

#119 slinnarsson closed 6 years ago
7
dropdown UI issues

#118 slinnarsson closed 6 years ago
2
Alignment of attributes on heatmap

#117 slinnarsson closed 6 years ago
0