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For 3D medical images, do you need to have animated borders for each slice? Additionally, the GUI only supports image formats, right?
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### What feature or change would you like to see made?
DICOM SEG is a standard for storing segmentation data in DICOM images. It is used to represent the boundaries of different structures in an imag…
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Hello! Thank you for making such a great segmentation toolkit. I was interested in using the pre-trained weights of the organ segmentation pipeline for a transfer learning problem; however, for this I…
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Upgrading data processing by:
- Providing individual segmentation from the organs in nifti files, this speeds the modeling process since we'll passing the model small images ( from (512, 512, 700) …
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I am trying to perform 3D segmentation of the CT DICOM images for the construction of 3D organ surface in the chest wall.
**Issue:** I sorted the DICOM image series as per their slice location. Th…
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(moose-env) E:\data>moosez -d ./input -m clin_ct_organs_v2
__ _______ ____ ________ ___ ___
/ |/ / __ \/ __ \/ __/ __/ |_ | / _ \
/ /|_/ / /_/ / /_/ /\ \/ _/ / __/_/ // /
…
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Analysis request for prostate cancer cohort as follows:
- [x] MOOSE cohort -> Validation of Segmentations by me
- [ ] Extract PET-Parameters from MOOSEd Segments
- [x ] Delete all hand draw…
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Here for y, it has got a fixed address: 'D:/DATA/Duke/XCAT/phan.pkl'
For training TransMorph Affine Model, what should we change it to? , or what is appropriate y for each input x.
https://githu…
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