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Hello,
First and foremost, thank you to the team for developing this important tool and pipeline for IMC data analysis. I'm wondering if there is any type of workshop, tutorial, or detailed manual o…
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Hi,
Thanks for the fantastic tool. I was wondering if it would be possible to input Scenic regulons (AUCell) as view in the mofa model, and if you ever tried to do so. Also, would this also require…
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https://mp.weixin.qq.com/s?__biz=MzA5NjAyMzU1OA==&mid=2247485359&idx=1&sn=ca3056625368cbf084bb4fa56cefcf19&chksm=90b722c6a7c0abd0d5d5b90a1496cebb0b361a58fdcd17313ba2c8c63222caeddeee0c418a32&xtrack=1&s…
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/tnjOukjIFd1M3hVpZ49qlQ
ixxmu updated
2 years ago
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I create a fully-multiomic dataset by creating two SingleData objects (one for each modality) and then following the tutorial to get the multiomic data.
Printing it gives:
```
A MultiomicDataset ob…
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```python
import fastavro
import datetime
from typing import cast
from azul.plugins.metadata.hca.transform import FileTransformer
from azul.service.avro_pfb import pfb_schema_from_field_types
…
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Hello
First of all : Congratulation for your tool ! We are using it a lot in our laboratory. It is the best tool to quickly put our single cell experiment on our Rserver so it can be analysis by the …
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@michalk8 caught this: https://rsinghlab.github.io/SCOT/
It's called SCOT and it does Gromov-Wasserstein for data integration. We need to change the name of this package (let's discuss here) and se…
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https://mp.weixin.qq.com/s/B1l_-1nsnVmW-uHoqD7Dow
ixxmu updated
2 years ago