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Hello!
This might be a long shot, not sure if this repo is still maintained, was trying to implement but get an error when running the singularity pull command
`singularity pull library://wytamm…
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Hello,
I find KB python super useful and efficient.
Recently I have moved to work EC2 instances and to test that everything was good I decided to re-run a sample in there using KB, the same versio…
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Hello,
I am trying to install sourcetracker in a cluster computer and I am getting an error after I test if my installation was successful.
What I did:
> conda create -n sourcetracker2 -c b…
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Hi,
Thank you for this great package.
I want to ask if there were plans to support duckdb connection for the R version of the package or how one could implement this
Thank you
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- how to install and setup renv
- combining renv + Docker (@leonardskynyrd will this overlap with what you were going to cover with Docker?)
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Agree rules / SOPs and add them to Best_practice.md:
- [x] Adding new tools
- [x] Scheduling jobs
- [x] Rebooting machines
- [ ] Clearing out scratch space
- [ ] Adding / editing users
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`collapse_isoforms_by_sam.py --input HL60_fltnc_dedup.fasta -s HL60_fltnc_dedup.fasta.sorted.sam -c 0.99 -i 0.95 --gen_mol_count -o HL60_fltnc_dedup.5merge &`
[1] 41376
(SQANTI3.env) [/home/ubuntu/Y…
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Below I have pasted R studio codes till question number 4, and there is an issue on question number 4.
#Read the file
download.file("https://raw.githubusercontent.com/markziemann/SLE712_files/mast…
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I followed the installation instructions. But it gives me the error:
~/anaconda3/bin/x86_64-conda-linux-gnu-c++ -Wl,--rpath=~/download/RAfilter/src/htslib/ -L htslib/ -lhts -I htslib/htslib/ -lpthre…
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While checking ImmunoChip mapping using snptk, I found that a few snps were deleted that exist in dbSNP (online).
```
==> tmp/map-using-rs-id/deleted_snps.txt