caporaso-lab sourcetracker2 issues

caporaso-lab / sourcetracker2

SourceTracker2

BSD 3-Clause "New" or "Revised" License

60 stars 45 forks source link

issues

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Demo doesn't work

#162 NeginValizadegan opened 1 month ago
1
St plots

#161 andy6a opened 4 months ago
9
ERRO

#160 Panda-smile opened 4 months ago
0
Make sourcetracker2 gibbs work as a command

#159 Oddant1 closed 4 months ago
4
sourcetracker2 erro

#158 Panda-smile opened 5 months ago
0
Error: Got unexpected extra argument (gibbs)

#157 Panda-smile closed 4 months ago
1
St maps

#156 andy6a closed 4 months ago
5
SourceTracker in R

#155 nikolgr opened 6 months ago
0
Use decimals as input

#154 tiantianlili opened 7 months ago
0
data/tiny-test/otu_table.qza

#153 kwabbsel94 opened 8 months ago
1
Diagnostics addition to sourcetracker

#152 andy6a closed 5 months ago
4
Update to Python 3.8 with Depreciated code fix

#151 andy6a closed 10 months ago
5
time_to_dead: float = 1.0 invalid syntax

#150 xianglongwei opened 1 year ago
0
PERF: Rely on BIOM for upstream data manipulation

#149 wasade opened 1 year ago
0
leave-one-out (LOO) strategy TypeError: Cannot cast ufunc subtract output from dtype('float64') to dtype('int64') with casting rule 'same_kind'

#148 CXang opened 2 years ago
0
Error message

#147 CsiAudrey opened 2 years ago
1
Sourcetracker 2 error

#146 MohammadHKhan opened 2 years ago
0
Unknown sources

#145 CsiAudrey opened 2 years ago
0
SyntaxError: invalid syntax

#144 tuttigiuperterra opened 2 years ago
2
Question: how to start

#143 tuttigiuperterra opened 2 years ago
1
Standard deviation results generated by sourcetracker2-2.0.1 and sourcetracker2-2.0.1-dev are different.

#142 dot4822 opened 2 years ago
1
Warning/Error with ipython hanging, solved by installing directly from github

#141 nickp60 opened 2 years ago
0
Create St2 environment conflicts

#140 Statesanalytical opened 2 years ago
0
Fixing citation.bib installation issues for QIIME2 plugin

#139 cameronmartino opened 3 years ago
1
Error: No such option: --per_sink_feature_assignments

#138 claireewilliams opened 3 years ago
2
Invalid rarefaction depth for source data

#137 Chenjw99 opened 3 years ago
2
Issue with SourceTracker2 installation

#136 lizdasa opened 3 years ago
8
Segmentation fault (core dumped)

#135 wuqunfu9999 opened 3 years ago
0
Installation issue -- parso requires Python >=3.6

#134 TayteCampbell closed 3 years ago
4
Is there a problem if I use the original R code instead of the new version for the command line?

#133 NeginValizadegan closed 3 years ago
1
Question: OTUs that are present in multiple sources

#132 WeiweiguoGuo opened 3 years ago
0
How to install qiime sourcetracker2 gibbs

#131 srosales712 closed 3 years ago
2
Minor fix on line 31

#130 kant closed 4 years ago
2
Working with sourcetracking without Source

#129 shashankx opened 4 years ago
2
Paradoxical results

#128 wangpeng407 closed 4 years ago
3
Output interpretation

#127 fra-cand closed 3 years ago
2
list of OTUs attributable to different sources

#126 ctekellogg opened 4 years ago
0
Adding a QIIME2 plugin for sourcetracker2 + tests for the cli and q2 plugin

#125 cameronmartino closed 4 years ago
21
Updated installation instructions

#124 adityabandla closed 4 years ago
2
Add instructions for installing development version

#123 johnchase opened 4 years ago
0
Filter

#122 johnchase opened 5 years ago
4
Leave one out error

#121 byroncrump closed 5 years ago
7
Issue 106

#120 johnchase closed 5 years ago
2
defining too many jobs fails silently

#119 wdwvt1 opened 5 years ago
0
Update sourcetracker to python 3.7

#118 johnchase opened 5 years ago
0
ENH: Replaces ipyparallel with multithreading

#117 johnchase closed 5 years ago
9
unbalanced data

#116 sachasuca opened 5 years ago
1
AttributeError: 'Series' object has no attribute 'applymap'

#115 aalexiev closed 5 years ago
1
Different results from different installs

#114 erimjr opened 5 years ago
16
ValueError: Mapping file or biom table passed contain no `source` samples

#113 sjschuld closed 5 years ago
2